Biomedical Computation Review

Summer 2008

Table of Contents

Featured Articles

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Successful Collaborations: Helping biomedicine and computation play well together

Katharine Miller

Mining Biomedical Literature: Using Computers to Extract Knowledge Nuggets

Kristin Sainani, PhD

In This Issue

When Does Computational Validation Trump Biological Validation?

Isaac Kohane MD, PhD

Why We Swing

Meredith A. Kunz

RNA Takes Shape

Kristin Sainani, PhD

Trojan Peptide

Louisa Dalton

Window into Microbial Behavior

Roberta Friedman, PhD

How the Zebrafish Gets its Stripes (or Spots)

Chandra Shekhar

Modeling the Spine, Cord and All

Meredith A. Kunz

OpenMM: Bringing GPU Acceleration Capabilities to Molecular Dynamics

Joy Ku, PhD

Parallel Computing on a Personal Computer

John Melanakos

An Avatar of Human Health

Katharine Miller

POPULAR ARTICLES

Big Data Analytics In Biomedical Research

Can the complexities of biology be boiled down to Amazon.com-style recommendations? The examples here suggest possible pathways to an intelligent healthcare system with big data at its core.

01/02/12 by Katharine Miller

AlloPathFinder User Profile: Jung-Chi Liao

Columbia’s Jung-Chi Liao seeks pathways within proteins using AlloPathFinder, a Simbios tool he co-developed while at Stanford.

10/01/09 by Kristin Sainani, PhD, and Katharine Miller

More Than Fate: Computation Addresses Hot Topics in Stem Cell Research

Using computational models, researchers are gaining traction toward understanding what makes a stem cell a stem cell; how gene expression drives stem cell differentiation; why studying stem cell heterogeneity is important; and, ultimately, how stem cells control their fate.

04/01/10 by Katharine Miller

Popular Tags

DATA MINING visualization

genomics SIMULATION neuroscience

biomechanics Systems Biology

DRUG DISCOVERY Cancer DNA

Molecular Dynamics bioinformatics

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