A new application automates MSM visualization
An unfolded protein can move through thousands of intermediate structures (conformations) before finding its properly folded state. One approach to understanding this process involves simulating a...
Feb, 19, 2013
Algorithm joins related publications in a chain from start to finish
A good story ties up all the loose ends. A new data-mining tool takes a stab at doing the same. Dubbed storytelling, the algorithm may make it easier to unearth unexpected connections in the...
Jan, 01, 2007
Recent Publications About Biomedical Computing
The field of biomedical computation is increasingly seen as a hot topic worthy of coverage in publications other than Biomedical Computation Review.
In June 2005, The Scientist will publish a...
Jun, 01, 2005
Dear Reader:
Welcome to the first issue of Biomedical Computation Review. With this quarterly publication, we hope to inspire and bring together scientists from the many fields that touch on...
Jun, 01, 2005
A pair of challenges increasingly threaten the success of bioinformatics research: convincing biologists to share their data and convincing computational colleagues to share their code. Many of us...
Jul, 01, 2006
From hardened software to scientific productivity, the NCBCs have changed the landscape for biomedical computing. What will happen when their funding expires?
It has been eight years since the National Institutes of Health (NIH) funded the first National Centers for Biomedical Computing (NCBCs). With two or three years remaining in the program (...
Oct, 19, 2012
Transparent peer review, replication studies, and journals of negative results all suggest change is on the horizon
As I was writing this editorial, I learned about yet another scientific paper being retracted. This time it was a genetics paper in Science, one of the hundreds of retractions that the blog...
Sep, 01, 2011
How errors in data, software, and methodology can teach us how to do better
In 2006, a paper in Nature Medicine suggested a novel and potentially revolutionary method for predicting patient responses to cancer therapies using gene signatures. The finding piqued the interest...
Sep, 01, 2011
Explaining biocomputation to non-scientists can leave a person tongue-tied. Technical jargon gets in the way, and the breadth of the field resists encapsulation.
To help out, and to reach out...
Oct, 01, 2007
Computation helps evaluate the nature of the NIH research portfolio in ways that were previously very difficult.
What biomedical research does the federal government fund? How is it allocated across important diseases? Has that changed over time? Answering these questions at any level of detail is tougher than...
Jun, 08, 2012
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