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Editor's Picks Fall 2005

Open Source reflections; designing with code re-use; and Cygwin

Do you have a few favorite books that you recommend to anyone with an interest in biomedical computing? Are there software products or Web sites that you love to evangelize? We’d like to open...
Sep, 01, 2005
COMPUTATIONAL DRUG DESIGN: new Tricks for Old Drugs

Computation can speed up the time it takes to find new binding partners for old drugs

When cheap drugs are needed fast, researchers and drug companies are increasingly turning to an interesting short-cut: repurposing existing drugs for new uses. Because drugs exert multiple actions in...
docking, drug design, drug repurposing
Apr, 01, 2011
Big Data Analytics In Biomedical Research

Can the complexities of biology be boiled down to Amazon.com-style recommendations?  The examples here suggest possible pathways to an intelligent healthcare system with big data at its core.

“We have recommendations for you,” announces the website Amazon.com each time a customer signs in.   This mega-retailer analyzes billions of customers’ purchases—nearly $...
Jan, 02, 2012
Point/Counterpoint: Should there be a separate funding mechanism for the development and maintenance of software and infrastructure?
  POINT/   NO:  Grant applications for the development and maintenance of software and infrastructure should compete with basic research applications. Biomedicine has a strong...
Jul, 01, 2009
Welcome Back

About this issue of Biomedical Computation Review

One of the main goals of this magazine is to create and foster a sense of community among the diverse disciplines that make up biomedical computation (hence our tagline: diverse disciplines, one...
Sep, 01, 2005
Follow the Money: Big Grants in Biomedical Computing

A virtual lab rat; simulated DNA; an artificial pancreas; & integrating mental health data

Several biomedical computing projects received multi-million dollar funding in the fall of 2011, including efforts to: simulate the cardiac physiology of the rat; build a state-of-the-art DNA...
diabetes, DNA, Orozco, pancreas
Jan, 02, 2012
Follow the Money: Big Grants in Biomedical Computing

The clear winner: Big Data

 

Several biomedical computing projects received big money in the fall of 2012. If there’s one clear winner, it’s “Big Data”: three of the grants focus on building new...
Feb, 19, 2013
Elastic Computing, Virtualization, and the Demise of the Common Cluster

With the advent of the cloud, computing is no longer about machines

A fter a hard day in “Lab,” it is rare to come home with the feeling of actually having accomplished anything tangible. Sure, the software I am developing has some new feature (...
Jan, 01, 2008
2012 Update on the National Centers for Biomedical Computing

The Principal Investigators weigh in

Ever since the National Institutes of Health (NIH) began funding the National Centers for Biomedical Computing (NCBCs) just over seven years ago, these powerhouses have been plugging away, building...
NCBC
Feb, 29, 2012
The Top Ten Advances of the Last Decade & The Top Ten Challenges of the Next Decade

A recognition of biocomputing's successes and a prediction of what's to come

The last ten years have seen huge leaps in biomedical computing. We now have new ways to integrate and understand vast quantities of data; the capacity for multi-scale biological modeling; and a...
bioinformatics tools, biomedical computing, CAD, computational modeling, data mining, disease surveillance, dynamic modeling, education, eric jakobsson, function prediction, genetic association, genome annotation, in silico screening, medical informatics, neuromodeling, prosthetics, sequence alignment, structure prediction, systems biology, systems biomedicine, telemedicine, tomography
Jun, 01, 2005
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