Home
  • About
  • Archive
  • Contact
  • Subscribe
Tapping the Brain: Decoding fMRI

How researchers are predicting specific thoughts from brain activity

Revealing the brain’s hidden stash of pictures, thoughts, and plans has, until recently, been the work of parlor magicians. Yet within the last decade, neuroscientists have gained powerful...
fMRI, memories, multivoxel pattern analysis, MVPA, neuroscience
Jan, 02, 2012
Mutual Information
Mutual information (MI) is defined in information theory as a measure of the dependencies between two random variables. There are many biomedical applications in which it is beneficial to quantify...
Jul, 01, 2007
Visualization in Space and Time: Seamless Pipelines Now Available

Advances in visualization changing work flows for understanding molecular dynamics, tracking cell movements, and designing interventional procedures

The pathway from raw data to valuable visualization of molecules, cells or organs being simulated over time involves several potentially painstaking steps. Typically, researchers must generate a set...
atrial fibrillation, developmental biology, ePMV, patient-specific, visualization
Sep, 02, 2011
Efficiently Evaluating Mathematical Expressions with OpenCL Code

A unique opportunity to build both flexibility and high performance into a piece of software.

OpenCL is a cross-platform language for doing general purpose computation on graphics processing units (GPUs) and other massively parallel architectures. One of its most interesting features is the...
Apr, 01, 2010
VIEW THIS ISSUE IN PDF
Feb, 22, 2012
Whole Virus Simulation

Simulation of a one-million-atom virus reveals unexpected twist

Giving new meaning to the phrase computer virus, researchers have created a computer simulation of an entire biological virus comprising approximately one million atoms.   “It wasn’t...
Jul, 01, 2006
Profiles in Computer Science Courage Part II: Advice on Taking the Plunge
Words of Advice from the Scientists Featured in Profiles in Computer Science Courage   Find  Your Passion “Not every computer scientist will fall in love with the field like I did,...
Apr, 01, 2011
Computational Biology Catches the Flu: Modeling the bug, the host, the world
The flu virus is an evolutionary marvel. Teams of experts design an appropriate flu vaccine annually just to keep up with the microbe’s ability to evade the human immune system. Multiple...
Jul, 01, 2006
Brain Folding

Computation shows that the skull guides the wrinkling

In the four months before birth, a fetus’s brain grows from a smooth tube of neurons into a highly crinkled, convolved mass of tissue. Because the cerebral cortex has a surface area nearly...
Jun, 01, 2010
Canonicity and Disease Ontologies
Ontologies provide biomedical researchers with an inventory of the universal features of reality across organisms, biomedical disciplines, and levels of granularity. In capturing what is universal,...
Jul, 01, 2009
  • ‹‹
  • 3 of 35
  • ››

SHARE THIS

  • Tweet
  • Email

RELATED ARTICLES

The Top Ten Advances of the Last Decade & The Top Ten Challenges of the Next Decade

A recognition of biocomputing's successes...

06/01/05 by Eric Jakobsson, PhD

On Your Mark, Get Set, Build Infrastructure: The NCBC Launch

The first four National Centers for Biomedical...

06/01/05 by Katharine Miller with an Introduction by Eric Jakobsson, PhD

Spaced out Neurons

A grant to develop software tools to analyze...

06/01/05 by Katharine Miller

More Than Fate: Computation Addresses Hot Topics in Stem Cell Research

Using computational models, researchers are...

04/01/10 by Katharine Miller

POPULAR ARTICLES

Big Data Analytics In Biomedical Research

Can the complexities of biology be boiled down to Amazon.com-style recommendations?  The examples here suggest possible pathways to an intelligent healthcare system with big data at its core.

01/02/12 by Katharine Miller

AlloPathFinder User Profile: Jung-Chi Liao

Columbia’s Jung-Chi Liao seeks pathways within proteins using AlloPathFinder, a Simbios tool he co-developed while at Stanford.

10/01/09 by Kristin Sainani, PhD, and Katharine Miller

More Than Fate: Computation Addresses Hot Topics in Stem Cell Research

Using computational models, researchers are gaining traction toward understanding what makes a stem cell a stem cell; how gene expression drives stem cell differentiation; why studying stem cell heterogeneity is important; and, ultimately, how stem cells control their fate.

04/01/10 by Katharine Miller

Popular Tags

DATA MINING  visualization

genomics  SIMULATION neuroscience

biomechanics Systems Biology

DRUG DISCOVERY Cancer DNA

Molecular Dynamics bioinformatics

SUBSCRIBE TO

RSS Feed
Subscribe to Print Edition
simbios logo

Supported by the National
Institutes of Health through
the NIH Roadmap for
Medical Research Grant.

Stanford University
James H. Clark Center S231
318 Campus Drive, MC: 5448
Stanford, CA 94305-5444

  • About
  • Archive
  • Contact
  • Subscribe