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OpenMM User Profile: Erik Lindahl, PhD

Erik Lindahl of Stockholm University uses OpenMM to speed up molecular simulations of membrane proteins and takes inspiration from Simbios’ professional approach to software development as he continues developing and maintaining GROMACS.

from http://biomedicalcomputationreview.org/content/simbios-bringing-biomedical-simulation-your-fingertips   Simbios provides two key benefits to Erik Lindahl, PhD, associate professor of...
Oct, 01, 2009
SimTK User Profile: Alain Laederach, PhD

Alain Laederach of the Wadsworth Center counts on Simtk.org as a long term software and data repository and says Simbios’ dissemination efforts will pay off.

from http://biomedicalcomputationreview.org/content/simbios-bringing-biomedical-simulation-your-fingertips   Alain Laederach, PhD, a research scientist at the Wadsworth Center and an assistant...
Oct, 01, 2009
Building RNA 3-D Structure
The structure of RNA is an important key to its function—including its role in disease. However, the structure of most RNAs is unknown because their extreme flexibility and high charge...
Mar, 01, 2009
Putting Heads Together

Upcoming biocomputing conferences

The 6th Annual International Conference on Computational Systems Bioinformatics (CSB2007) coordinated by the Life Sciences Society. WHAT: This conference is designed for any scientist interested in...
Jul, 01, 2007
CAMPAIGN: Expanding the Universe for Clustering Algorithms

Speedups produced by a C++ library of Clustering Algorithms for Massively Parallel Architectures Including GPU Nodes

GenBank, a repository for storing biological sequences, currently contains some 124 billion base pairs and is doubling in size every 18 months.1 Though not a huge number compared to the billion...
Apr, 01, 2011
RNA Builder User Profile: Rick Russell, PhD

Through RNABuilder, Simbios brings computational modeling to Rick Russell’s lab at the University of Texas.

from http://biomedicalcomputationreview.org/content/simbios-bringing-biomedical-simulation-your-fingertips   Rick Russell, PhD, associate professor of chemistry and biochemistry at the...
Oct, 01, 2009
NAST User Profile: Li Niu, PhD

Li Niu of the University of Albany works with Simbios to understand an unusual RNA.

from http://biomedicalcomputationreview.org/content/simbios-bringing-biomedical-simulation-your-fingertips   Li Niu, PhD, associate professor of chemistry at the University of Albany, SUNY found...
Oct, 01, 2009
Putting Heads Together
MICCAI 2007, the 10th International Conference on Medical Image Computing and Computer Assisted Intervention. What: MICCAI typically attracts over 600 world leading scientists, engineers and...
Oct, 01, 2007
Welcome Back

About this issue of Biomedical Computation Review

One of the main goals of this magazine is to create and foster a sense of community among the diverse disciplines that make up biomedical computation (hence our tagline: diverse disciplines, one...
Sep, 01, 2005
On Your Mark, Get Set, Build Infrastructure: The NCBC Launch

The first four National Centers for Biomedical Computing take off

WHY NATIONAL CENTERS? Four National Centers for Biomedical Computing were launched by the NIH in 2004 with $20 million in funding for each center over five years. The reason: We need to make...
Jun, 01, 2005
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