How to share knowledge, data, tools, and computational resources in a sustainable manner
Once upon a time, a deep divide existed between scientists who did and those who did not have easy access to scientific content (journals, lectures, data), hardware (imaging devices, lab instruments...
Apr, 01, 2011
Profiles in Computer Science Courage Part I: Reflections on the rewards of plunging into biomedicine
Interviews with Leonidas Guibas, Ron Shamir, Michael Black, David Haussler, Daphne Koller, Erin Halperin, Gene Myers, Paul Groth and Bruce Donald
To a computer scientist, the fields of biology and medicine can seem like the vast Pacific Ocean, says Leonidas Guibas, PhD, professor of computer science at Stanford University. “You go to the...
Apr, 01, 2011
Keeping up with the literature is a challenge for all scientists. But some researchers are making it easier by enhancing the usability and understanding of an article’s contents in a variety of...
Jul, 01, 2009
They've gone from hype to backlash. Now it's time for reality: How microarrays are being used to benefit healthcare
When DNA microarray technology emerged more than a decade ago, it was met with unbridled enthusiasm. By allowing scientists to look at the expression of enormous numbers of genes in the genome...
Oct, 01, 2006
Janelia farmers pursue novel, cross-disciplinary collaborations to work on long-term, unwieldy scientific problems difficult to tackle in a single laboratory
The folks at Howard Hughes Medical Institute who dreamed up Janelia Farm say it is as much a social innovation as a scientific one. “We are creating a different culture here,” says Gerald...
Jul, 01, 2006
POINT/
NO: Grant applications for the development and maintenance of software and infrastructure should compete with basic research applications.
Biomedicine has a strong...
Jul, 01, 2009
Early evidence suggests a mixed picture
Stanford University’s 2004-2005 computer science T-shirts exhibited symbols for six men and one woman -- an accurate portrayal of the ratio in the department and only slightly worse than the...
Apr, 01, 2006
There is growing recognition that epigenetics may be just as important as genetics in human health and disease.
In the early 19th century, Jean-Baptiste Lamarck explained evolution as the inheritance of acquired traits; he believed that changes due to behaviors and exposures in one generation could be passed...
Jun, 01, 2010
New release improves both GUI and API
OpenSim, the neuromuscular modeling and simulation software, is now available in a new digit: 3.0. The change (up from 2.4) reflects significant improvements that make this open source tool more...
Oct, 19, 2012
Biomarker research, genetics, and imaging are all coming into play
In 1906, at a small medical meeting in Tübingen, Germany, physician Alois Alzheimer gave a now-famous presentation about a puzzling patient. At age 51, Auguste D.’s memory was failing...
Oct, 01, 2007